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Title
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PlantGM: a database for genetic markers in rice (Oryza sativa) and Chinese cabbage (Brassica rapa)
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Authors
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Chang Kug Kim1, Jung Sun Kim2 Gang Seob Lee3, Beom Seok Park2 and Jang Ho Hahn1, *
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Affiliation
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1Bioinformatics Division, National Institute of Agricultural Biotechnology (NIAB), Suwon 441-707, Korea; 2Brassica Genomics Team, NIAB, Korea; 3Cell and Genetics Division, NIAB, Korea;
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jhhahn@rda.go.kr; * Corresponding author
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Article Type
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Database
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Date
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received September 04, 2008; accepted September 21, 2008; published October 17, 2008 | |
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Abstract |
The Plant Genetic Map Database (PlantGM) has been developed as a web-based system which provides information about genetic markers in rice (Oryza sativa) and Chinese cabbage (Brassica rapa). The database has three major parts and functions; (1) Map Search, (2) Marker Search, and (3) QTL Search. At present, the database provides characterization information for about 3258 genetic markers. It has 2800 RFLP and 112 QTL markers related to rice in addition to 321 RFLP and 25 PCR-based markers for Chinese cabbage. In addition, a genetic linkage map was also constructed by using 1,054 markers from 2,912 markers in rice.
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Keywords
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genetic map; genetic marker; QTL marker; rice; Chinese cabbage
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Citation
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Kim et al., Bioinformation 3(1): 61-62 (2008)
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Edited by
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P. Kangueane
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ISSN
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0973-2063
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Publisher
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Biomedical Informatics
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License
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This is an Open Access article which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. This is distributed under the terms of the Creative Commons Attribution License.
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