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Title

Genetic diversity and species pattern of Trichoderma and Hypocrea in Manipur using in-silico analysis

 

Authors

Thongram Kamala1, Sarangthem Indira Devi1*, Gourshyam Thingnam2, Bharat Gopalrao Somkuwar2

 

Affiliation

1Microbial Resources Division; 2Biological Database and Bioinformatics Division, Institute of Bioresources and Sustainable Development, Departent of Biotechnology, Government of India, Takyelpat, Imphal-795001, Manipur, India.

 

Email

sidevi1@yahoo.co.in; *Corresponding author

 

Article Type

Hypothesis

 

Date

Received December 17, 2012; Accepted December 21, 2012; Published January 18, 2013

 

Abstract

We investigated the occurrence and genetic diversity of Trichoderma and Hypocrea in Manipur which lies in the Indo-Burma biodiversity hot spot region. 65 Trichoderma isolates were identified at species level by morphological as well as sequence based analysis of the internal transcribed spacer region 1 and 4. Altogether 22 different species of Trichoderma and Hypocrea were found, of which Trichoderma harzianum represent the dominant species. Phylogenetic analysis reveals a clear cut distinction of strains isolated from various collection sites which further hints the need for detail study of Trichoderma on molecular level.

 

Citation

Kamala et al.  Bioinformation 9(2): 106-111 (2013)

 

Edited by

P Kangueane

 

ISSN

0973-2063

 

Publisher

Biomedical Informatics

 

License

This is an Open Access article which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. This is distributed under the terms of the Creative Commons Attribution License.