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Title |
Ssa miRNAs DB: online repository of in silico predicted miRNAs in salmo salar |
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Authors |
D Reyes, V Cepeda, R González & Rodrigo Vidal |
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Affiliation |
Laboratory of Molecular Ecology, Genomics and Evolutionary Studies, Department of Biology, Faculty of Chemistry and Biology, Santiago de Chile University, Chile & Centro de Biotecnología Acuícola (CBA)d.
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ruben.vidal@usach.cl; *Corresponding author
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Article Type |
Database
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Date |
Received March 03, 2012; Accepted March 15, 2012; Published March 31, 2012 |
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Abstract |
The Atlantic salmon (Salmo salar) is a very valuable commercial salmonid species. As with other aquaculture species, intensive aquaculture of Atlantic salmon often faces disease problems especially in early life stages which can limit stable production of the species. ‘Ssa miRNAs DB’, a bioinformatics and manually curated database, aims at providing a comprehensive resource of microRNA in Altantic salmon, with a user friendly interface for a convenient retrieval of each entry by microRNA ID or target gene. The current version of Ssa miRNAs DB involved the prediction of 41 and 266 homologous and novel microRNAs, respectively.
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Avilabilty |
http://www.molgenv.com/ssa_mirnas_db_home.php
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Keywords |
Atlantic salmon, microRNA, HTML, Database
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Citation |
Reyes et al Bioinformation 8(6): 284-286 (2012) |
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Edited by |
P Kangueane
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ISSN |
0973-2063
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Publisher |
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License |
This is an Open Access article which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. This is distributed under the terms of the Creative Commons Attribution License. |