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Title

 

 

 

 

 

Predicted RNA secondary structures for the conserved regions in dengue virus

 

Authors

 

Pallavi Somvanshi*, Prahlad Kishore Seth

 

Affiliation

Bioinformatics Centre, Biotech Park, Sector G, Jankipuram, Lucknow 226021, Uttar Pradesh, India

 

Email

 

psomvanshi@gmail.com

Article Type

 

Hypothesis

Date

 

Received December 03, 2008; revised April 03 2009; accepted April 16, 2009; published August 2, 2009

 

Abstract

Dengue fever, dengue hemorrhagic fever and dengue shock syndrome are the prevalent mosquito borne viral infections worldwide. The dengue virus belongs to the genus flavivirus with conserved RNA domains peptidase_S7 and dexHc among its members. The secondary structures for RNA domains peptidase_S7 and DexHc are hence predicted and discussed with other known viral RNA structures to glean structural insights through comparison.

 

Keywords

RNA, dengue; structure; prediction; thermodynamics; pathogenicity

 

Citation


Somvanshi & Seth, Bioinformation 3(10): 435-439 (2009)

Edited by

P. Kangueane

 

ISSN

0973-2063

 

Publisher

Biomedical Informatics

 

License

 

 

This is an Open Access article which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. This is distributed under the terms of the Creative Commons Attribution License.